Syris
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Syris Configuration
Image Processing
Geometry
Materials
Optical Elements
Math
Physics
Experiments
Bodies
Devices
OpenCL GPU Utilities
Profiling GPU Code
Examples
Syris
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Index
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B
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C
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D
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E
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F
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G
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I
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
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W
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X
A
add() (syris.bodies.base.CompositeBody method)
(syris.profiling.DummyProfiler method)
(syris.profiling.Profiler method)
all_bodies (syris.bodies.base.CompositeBody attribute)
angle() (in module syris.geometry)
apply_blur() (syris.devices.sources.XRaySource method)
apply_transformation() (syris.bodies.base.MovableBody method)
are_images_supported() (in module syris.gpu.util)
areas (syris.bodies.mesh.Mesh attribute)
average() (syris.imageprocessing.Tiler method)
B
BendingMagnet (class in syris.devices.sources)
bin_image() (in module syris.imageprocessing)
bind() (syris.geometry.Trajectory method)
bind_trajectory() (syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
blur_with_gaussian() (in module syris.imageprocessing)
bodies (syris.bodies.base.CompositeBody attribute)
Body (class in syris.bodies.base)
bound (syris.geometry.Trajectory attribute)
bounding_box (syris.bodies.base.CompositeBody attribute)
(syris.bodies.base.MovableBody attribute)
(syris.bodies.isosurfaces.MetaBall attribute)
(syris.bodies.mesh.Mesh attribute)
BoundingBox (class in syris.geometry)
C
cache() (in module syris.gpu.util)
cache_projection (syris.bodies.base.MovableBody attribute)
Camera (class in syris.devices.cameras)
center (syris.bodies.base.MovableBody attribute)
center_of_bbox (syris.bodies.mesh.Mesh attribute)
center_of_gravity (syris.bodies.mesh.Mesh attribute)
clear_transformation() (syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
closest() (in module syris.geometry)
(in module syris.math)
CompositeBody (class in syris.bodies.base)
compute_aliasing_limit() (in module syris.physics)
compute_collection() (in module syris.physics)
compute_diffraction_angle() (in module syris.physics)
compute_intensity() (syris.experiments.Experiment method)
compute_propagation_distance_limit() (in module syris.physics)
compute_propagation_sampling() (in module syris.physics)
compute_propagator() (in module syris.physics)
compute_slices() (syris.bodies.mesh.Mesh method)
control_points (syris.geometry.Trajectory attribute)
convert() (syris.devices.detectors.Detector method)
create_sample() (in module examples.trajectory)
critical_energy (syris.devices.sources.BendingMagnet attribute)
crop() (in module syris.imageprocessing)
crop_to_aperture() (in module examples.fresnel)
D
d_wavelength (syris.devices.filters.Scintillator attribute)
decimate() (in module syris.imageprocessing)
derivative_fit() (in module syris.geometry)
Detector (class in syris.devices.detectors)
diff (syris.bodies.mesh.Mesh attribute)
difference_root() (in module syris.math)
direct_primitive_bodies (syris.bodies.base.CompositeBody attribute)
DummyProfiler (class in syris.profiling)
E
energies (syris.materials.Material attribute)
energy_to_wavelength() (in module syris.physics)
examples.composite_body (module)
examples.edge_enhancement (module)
examples.energy_filter (module)
examples.experiment (module)
examples.fresnel (module)
examples.mesh (module)
examples.mesh_scan (module)
examples.metaballs (module)
examples.multigpu (module)
examples.paganin (module)
examples.propagator (module)
examples.simple (module)
examples.source (module)
examples.source_blur (module)
examples.speed (module)
examples.tomographic_rotation (module)
examples.tomography_4D (module)
examples.trajectory (module)
examples.transformation (module)
examples.transmission_function_sampling (module)
examples.varconvolution (module)
execute_profiled() (in module syris.gpu.util)
Experiment (class in syris.experiments)
extrema (syris.bodies.mesh.Mesh attribute)
F
fft_2() (in module syris.imageprocessing)
fftfreq() (in module syris.math)
Filter (class in syris.devices.filters)
FixedSpectrumSource (class in syris.devices.sources)
furthest_point (syris.bodies.base.CompositeBody attribute)
(syris.bodies.base.MovableBody attribute)
(syris.bodies.isosurfaces.MetaBall attribute)
(syris.bodies.mesh.Mesh attribute)
(syris.geometry.Trajectory attribute)
fwnm_to_sigma() (in module syris.math)
G
gama (syris.devices.sources.BendingMagnet attribute)
GaussianFilter (class in syris.devices.filters)
get_all_varconvolutions() (in module syris.gpu.util)
get_array() (in module syris.gpu.util)
get_attenuation() (syris.devices.filters.MaterialFilter method)
get_attenuation_coefficient() (syris.materials.Material method)
get_cache() (in module syris.gpu.util)
get_command_queues() (in module syris.gpu.util)
get_conversion_factor() (syris.devices.filters.Scintillator method)
get_cpu_platform() (in module syris.gpu.util)
get_cuda_platform() (in module syris.gpu.util)
get_data() (syris.profiling.ProfileReconstructor method)
get_degenerate_triangles() (syris.bodies.mesh.Mesh method)
get_direction() (syris.geometry.Trajectory method)
get_distance() (syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
get_distances() (syris.geometry.Trajectory method)
get_event_duration() (in module syris.gpu.util)
get_flux() (syris.devices.sources.BendingMagnet method)
(syris.devices.sources.FixedSpectrumSource method)
(syris.devices.sources.Wiggler method)
get_format_string() (in module syris.bodies.isosurfaces)
get_gauss_2d() (in module syris.imageprocessing)
get_gpu_platform() (in module syris.gpu.util)
get_host() (in module syris.gpu.util)
get_image() (in module syris.gpu.util)
(syris.devices.cameras.Camera method)
get_intel_platform() (in module syris.gpu.util)
get_light_yield() (syris.devices.filters.Scintillator method)
get_luminescence() (syris.devices.filters.Scintillator method)
get_max() (syris.geometry.BoundingBox method)
get_maximum_dt() (syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
(syris.geometry.Trajectory method)
get_maximum_du() (syris.geometry.Trajectory method)
get_metaobjects_source() (in module syris.gpu.util)
get_min() (syris.geometry.BoundingBox method)
get_moved_groups() (in module syris.bodies.isosurfaces)
get_next_time() (syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
(syris.bodies.simple.StaticBody method)
(syris.devices.filters.Filter method)
(syris.devices.filters.GaussianFilter method)
(syris.devices.filters.MaterialFilter method)
(syris.devices.sources.BendingMagnet method)
(syris.devices.sources.XRaySource method)
(syris.experiments.Experiment method)
(syris.geometry.Trajectory method)
(syris.opticalelements.OpticalElement method)
get_num_tiles() (in module syris.imageprocessing)
get_parameter() (syris.geometry.Trajectory method)
get_platform() (in module syris.gpu.util)
get_platform_by_device_type() (in module syris.gpu.util)
get_point() (syris.geometry.Trajectory method)
get_precision_header() (in module syris.gpu.util)
get_program() (in module syris.gpu.util)
get_projected_points() (syris.geometry.BoundingBox method)
get_quantum_efficiency() (syris.devices.cameras.Camera method)
get_refractive_index() (syris.materials.Material method)
get_rescaled_transform_matrix() (syris.bodies.base.MovableBody method)
get_rotation_displacement() (in module syris.geometry)
get_source() (in module syris.gpu.util)
get_surrounding_points() (in module syris.math)
get_transform_const() (syris.bodies.isosurfaces.MetaBall method)
get_varconvolution_source() (in module syris.gpu.util)
get_varconvolve_disk() (in module syris.gpu.util)
get_varconvolve_gauss() (in module syris.gpu.util)
get_varconvolve_propagator() (in module syris.gpu.util)
get_visible_attenuation() (syris.devices.detectors.Detector method)
I
ifft_2() (in module syris.imageprocessing)
infimum() (in module syris.math)
init() (in module syris)
init_logging() (in module syris.config)
init_programs() (in module syris.gpu.util)
insert() (syris.imageprocessing.Tiler method)
interpolate_1d() (in module syris.geometry)
is_fps_feasible() (in module syris.devices.cameras)
is_normalized() (in module syris.geometry)
is_single() (syris.config.Precision method)
is_wavefield_sampling_ok() (in module syris.physics)
L
last_position (syris.bodies.base.MovableBody attribute)
length (syris.geometry.Trajectory attribute)
length() (in module syris.geometry)
Lens (class in syris.devices.lenses)
log_attributes() (in module examples.mesh_scan)
M
main() (in module examples.experiment)
(in module examples.fresnel)
(in module examples.mesh)
(in module examples.propagator)
(in module examples.trajectory)
(in module examples.transformation)
make_circle() (in module examples.trajectory)
make_cube() (in module syris.bodies.mesh)
make_devices() (in module examples.experiment)
make_fromfile() (in module syris.materials)
make_grid() (in module syris.bodies.simple)
make_ground_truth() (in module examples.mesh_scan)
make_henke() (in module syris.materials)
make_opencl_defaults() (in module syris.gpu.util)
make_pco_dimax() (in module syris.devices.cameras)
make_pmasf() (in module syris.materials)
make_points() (in module syris.geometry)
make_sequence() (syris.experiments.Experiment method)
make_source_blur() (syris.experiments.Experiment method)
make_sphere() (in module syris.bodies.simple)
make_stepanov() (in module syris.materials)
make_tile_offsets() (in module syris.imageprocessing)
make_tiles() (in module syris.imageprocessing)
make_topotomo() (in module syris.devices.sources)
make_vcomplex() (in module syris.gpu.util)
match_range() (in module syris.math)
Material (class in syris.materials)
MaterialError
MaterialFilter (class in syris.devices.filters)
max_triangle_x_diff (syris.bodies.mesh.Mesh attribute)
maximum_derivative_parameter() (in module syris.geometry)
merge() (syris.geometry.BoundingBox method)
merge_tiles() (in module syris.imageprocessing)
Mesh (class in syris.bodies.mesh)
MetaBall (class in syris.bodies.isosurfaces)
MetaBalls (class in syris.bodies.isosurfaces)
MovableBody (class in syris.bodies.base)
move() (syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
moved() (syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
N
name (syris.materials.Material attribute)
normalize() (in module syris.geometry)
normals (syris.bodies.mesh.Mesh attribute)
num_triangles (syris.bodies.mesh.Mesh attribute)
numerical_aperture (syris.devices.lenses.Lens attribute)
O
OpenCL (class in syris.config)
OpticalElement (class in syris.opticalelements)
overlap() (in module syris.geometry)
overlaps() (syris.geometry.BoundingBox method)
P
pack() (syris.bodies.isosurfaces.MetaBall method)
pad() (in module syris.imageprocessing)
parse_args() (in module examples.fresnel)
(in module examples.mesh)
(in module examples.trajectory)
pixel_size (syris.geometry.Trajectory attribute)
plot() (in module syris.profiling)
points (syris.geometry.BoundingBox attribute)
(syris.geometry.Trajectory attribute)
position (syris.bodies.base.MovableBody attribute)
Precision (class in syris.config)
print_rounded() (in module examples.transformation)
Profiler (class in syris.profiling)
ProfileReconstructor (class in syris.profiling)
project() (syris.bodies.base.Body method)
(syris.bodies.base.MovableBody method)
project_metaballs() (in module syris.bodies.isosurfaces)
project_metaballs_naive() (in module syris.bodies.isosurfaces)
propagate() (in module syris.physics)
propagate_analytically() (in module examples.fresnel)
propagate_numerically() (in module examples.fresnel)
Q
qmap() (in module syris.gpu.util)
R
read_blender_obj() (in module syris.bodies.mesh)
ref_index_to_attenuation_coeff() (in module syris.physics)
refractive_indices (syris.materials.Material attribute)
reinterpolate() (in module syris.geometry)
remove() (syris.bodies.base.CompositeBody method)
remove_all() (syris.bodies.base.CompositeBody method)
rescale() (in module syris.imageprocessing)
restore_transformation_matrices() (syris.bodies.base.CompositeBody method)
result_tile_shape (syris.imageprocessing.Tiler attribute)
roi (syris.geometry.BoundingBox attribute)
rotate() (in module syris.geometry)
(syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
run() (syris.profiling.Profiler method)
S
save() (syris.materials.Material method)
save_transformation_matrices() (syris.bodies.base.CompositeBody method)
scale() (in module syris.geometry)
scan() (in module examples.mesh_scan)
Scintillator (class in syris.devices.filters)
set_precision() (syris.config.Precision method)
shutdown() (syris.profiling.Profiler method)
sigma_to_fwnm() (in module syris.math)
sort() (syris.bodies.mesh.Mesh method)
StaticBody (class in syris.bodies.simple)
stationary (syris.geometry.Trajectory attribute)
supremum() (in module syris.math)
syris (module)
syris.bodies.base (module)
syris.bodies.isosurfaces (module)
syris.bodies.mesh (module)
syris.bodies.simple (module)
syris.config (module)
syris.devices.cameras (module)
syris.devices.detectors (module)
syris.devices.filters (module)
syris.devices.lenses (module)
syris.devices.sources (module)
syris.experiments (module)
syris.geometry (module)
syris.gpu.util (module)
syris.imageprocessing (module)
syris.materials (module)
syris.math (module)
syris.opticalelements (module)
syris.physics (module)
syris.profiling (module)
T
tile_indices (syris.imageprocessing.Tiler attribute)
tile_shape (syris.imageprocessing.Tiler attribute)
Tiler (class in syris.imageprocessing)
time (syris.bodies.base.CompositeBody attribute)
(syris.experiments.Experiment attribute)
(syris.geometry.Trajectory attribute)
time_tck (syris.geometry.Trajectory attribute)
times (syris.geometry.Trajectory attribute)
Trajectory (class in syris.geometry)
TrajectoryError
transfer() (in module syris.physics)
(syris.opticalelements.OpticalElement method)
transfer_fourier() (syris.opticalelements.OpticalElement method)
transfer_many() (in module syris.physics)
transform() (in module examples.transformation)
(syris.bodies.mesh.Mesh method)
transform_vector() (in module syris.geometry)
translate() (in module syris.geometry)
(syris.bodies.base.CompositeBody method)
(syris.bodies.base.MovableBody method)
triangles (syris.bodies.mesh.Mesh attribute)
U
update_projection_cache() (syris.bodies.base.MovableBody method)
V
varconvolve() (in module syris.imageprocessing)
varconvolve_disk() (in module syris.imageprocessing)
varconvolve_gauss() (in module syris.imageprocessing)
vectors (syris.bodies.mesh.Mesh attribute)
W
wavelength_to_energy() (in module syris.physics)
wavelengths (syris.devices.filters.Scintillator attribute)
Wiggler (class in syris.devices.sources)
X
XRaySource (class in syris.devices.sources)
XRaySourceError
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